STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMTC2Transmembrane O-mannosyltransferase targeting cadherins 2. (828 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.934
INTS1
Integrator complex subunit 1.
    
 0.837
INTS13
Integrator complex subunit 13.
    
 0.826
INTS3
Integrator complex subunit 3.
    
 0.805
INTS5
Integrator complex subunit 5.
    
 0.805
ENSARWP00000003591
annotation not available
   
 0.772
ENSARWP00000003592
annotation not available
   
 0.772
INTS10
Integrator complex subunit 10.
    
 0.768
ENSARWP00000001035
annotation not available
    
 0.761
NUDT12
Nudix hydrolase 12.
   
  0.760
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.