STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS26CVPS26 endosomal protein sorting factor C. (297 aa)    
Predicted Functional Partners:
VPS29
VPS29 retromer complex component.
   
 0.953
VPS35
Vacuolar protein sorting-associated protein 35.
    
 0.930
LOC112970643
Vacuolar protein sorting-associated protein 29-like.
   
 0.916
LOC112966884
Coiled-coil domain-containing protein 22-like.
   
 
 0.869
VPS35L
VPS35 endosomal protein sorting factor like.
   
 0.822
COMMD6
COMM domain containing 6.
    
 
 0.818
COMMD4
COMM domain containing 4.
    
 
 0.818
COMMD1
Copper metabolism domain containing 1.
    
 
 0.811
COMMD3
COMM domain containing 3.
    
 
 0.810
COMMD2
COMM domain-containing protein 2-like.
    
 
 0.797
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.