STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM109Transmembrane protein 109. (236 aa)    
Predicted Functional Partners:
ANAPC4
Anaphase promoting complex subunit 4.
    
  0.991
CDC16
Cell division cycle 16.
    
  0.950
ANAPC1
Anaphase promoting complex subunit 1.
    
  0.942
GATB
glutamyl-tRNA amidotransferase subunit B.
    
 0.936
LOC112973901
Proline dehydrogenase 1, mitochondrial-like.
  
 
 0.920
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.910
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
    
 0.896
ASNS
Asparagine synthetase (glutamine-hydrolyzing).
    
 0.896
GLS
Glutaminase.
    
 0.892
ASS1
Argininosuccinate synthase 1.
  
 
 0.888
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.