STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLI1GLI family zinc finger 1. (1284 aa)    
Predicted Functional Partners:
SUFU
SUFU negative regulator of hedgehog signaling.
    
 0.998
SPOP
Speckle type BTB/POZ protein.
   
 0.946
SPOPL
Speckle type BTB/POZ protein like.
   
 0.946
KIF7
Kinesin family member 7.
    
 0.941
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 0.935
GLI2
GLI family zinc finger 2.
   
0.931
KIF27
Kinesin family member 27.
    
 0.926
FBXW11
F-box and WD repeat domain containing 11.
    
 0.922
STK36
Serine/threonine kinase 36.
    
 0.921
GLI3
GLI family zinc finger 3.
     
0.920
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.