STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HIPK1Homeodomain interacting protein kinase 1. (1211 aa)    
Predicted Functional Partners:
RASSF5
Ras association domain family member 5.
    
  0.822
HIPK3
Homeodomain interacting protein kinase 3.
   
 
 
0.808
HIPK2
Homeodomain interacting protein kinase 2.
  
  
 
0.788
DCAF7
DDB1 and CUL4 associated factor 7.
   
 
 0.766
PIN1
Peptidylprolyl cis/trans isomerase, NIMA-interacting 1.
    
 0.663
SUMO1
Small ubiquitin like modifier 1.
    
 0.659
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 0.656
ENSARWP00000006256
annotation not available
    
 0.628
ATM
ATM serine/threonine kinase.
    
 0.616
TP63
Tumor protein p63.
    
 0.612
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.