STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC31Leucine rich repeat containing 31. (582 aa)    
Predicted Functional Partners:
RANBP2
E3 SUMO-protein ligase RanBP2-like.
   
  0.671
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.585
LOC112974198
Ribonuclease CL2-like.
   
  0.564
RPS27A
Ribosomal protein S27a.
    
  0.564
ATG16L1
Autophagy related 16 like 1.
    
 0.547
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.545
NEK7
NIMA related kinase 7.
    
  0.515
NEK6
NIMA related kinase 6.
    
  0.515
TMEM174
Transmembrane protein 174.
      
 0.513
IL1B
Interleukin-1 receptor antagonist protein-like.
    
 0.493
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.