STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112969462Vascular non-inflammatory molecule 3-like. (505 aa)    
Predicted Functional Partners:
PANK4
Pantothenate kinase 4 (inactive).
     
 0.841
NUDT12
Nudix hydrolase 12.
   
 0.815
HLCS
Holocarboxylase synthetase.
    
 0.749
BCAT1
Branched chain amino acid transaminase 1.
  
 0.736
SDHA
Succinate dehydrogenase complex flavoprotein subunit A.
    
 0.713
SRM
Spermidine synthase.
  
 
 0.707
SMS
Spermine synthase.
  
 
 0.707
AASS
Aminoadipate-semialdehyde synthase.
    
  0.706
ACLY
ATP citrate lyase.
  
  0.702
SORD
Sorbitol dehydrogenase.
  
 0.694
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.