STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC25Coiled-coil domain containing 25. (215 aa)    
Predicted Functional Partners:
MYOT
Myotilin.
    
 0.663
PKD2L2
Polycystin 2 like 2, transient receptor potential cation channel.
    
 0.663
PKD2
Polycystin 2, transient receptor potential cation channel.
    
 0.663
PKD1
Polycystin 1, transient receptor potential channel interacting.
    
 0.663
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
    
 0.663
PKDREJ
Polycystin family receptor for egg jelly.
    
 0.663
PKD1L2
Polycystin 1 like 2.
    
 0.663
NEMF
Nuclear export mediator factor.
   
 
 0.623
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
      
 0.580
TBCA
Tubulin folding cofactor A.
   
    0.534
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.