STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARAM_003360Zn(2)-C6 fungal-type domain-containing protein. (1382 aa)    
Predicted Functional Partners:
ARAM_001287
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.868
ARAM_002041
Choline sulfatase.
  
 0.761
ARAM_002148
Uncharacterized protein.
  
 
 0.693
ARAM_000979
Putative beta-1,6-glucanase; Belongs to the glycosyl hydrolase 30 family.
  
 
 0.674
ARAM_006217
Uncharacterized protein.
  
 
 0.674
ARAM_003359
Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.
 
   
  0.622
ARAM_004776
Beta-galactosidase.
   
 0.592
ARAM_003474
Beta-galactosidase.
   
 0.592
ARAM_003047
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
   
 
  0.589
ARAM_005164
Glyco_hyd_65N_2 domain-containing protein.
    
 0.538
Your Current Organism:
Aspergillus rambellii
NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580
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