Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARAM_000696 | ARAM_003499 | A0A0F8V0K4 | A0A0F8V515 | Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. | 0.999 |
ARAM_000696 | ARAM_007715 | A0A0F8V0K4 | A0A0F8URR8 | Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | APH domain-containing protein. | 0.518 |
ARAM_001045 | ARAM_003201 | A0A0F8XP07 | A0A0F8V895 | RPA_C domain-containing protein. | SH3 domain-containing protein. | 0.452 |
ARAM_001045 | ARAM_003499 | A0A0F8XP07 | A0A0F8V515 | RPA_C domain-containing protein. | Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. | 0.439 |
ARAM_001045 | ARAM_003810 | A0A0F8XP07 | A0A0F8TXX7 | RPA_C domain-containing protein. | RRM domain-containing protein. | 0.436 |
ARAM_001045 | ARAM_007715 | A0A0F8XP07 | A0A0F8URR8 | RPA_C domain-containing protein. | APH domain-containing protein. | 0.536 |
ARAM_002786 | ARAM_004002 | A0A0F8WDK3 | A0A0F8VHX5 | 2Fe-2S iron-sulfur cluster binding domain protein. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.847 |
ARAM_002786 | ARAM_007715 | A0A0F8WDK3 | A0A0F8URR8 | 2Fe-2S iron-sulfur cluster binding domain protein. | APH domain-containing protein. | 0.586 |
ARAM_003201 | ARAM_001045 | A0A0F8V895 | A0A0F8XP07 | SH3 domain-containing protein. | RPA_C domain-containing protein. | 0.452 |
ARAM_003201 | ARAM_003810 | A0A0F8V895 | A0A0F8TXX7 | SH3 domain-containing protein. | RRM domain-containing protein. | 0.841 |
ARAM_003201 | ARAM_007715 | A0A0F8V895 | A0A0F8URR8 | SH3 domain-containing protein. | APH domain-containing protein. | 0.477 |
ARAM_003499 | ARAM_000696 | A0A0F8V515 | A0A0F8V0K4 | Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. | Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | 0.999 |
ARAM_003499 | ARAM_001045 | A0A0F8V515 | A0A0F8XP07 | Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. | RPA_C domain-containing protein. | 0.439 |
ARAM_003499 | ARAM_007715 | A0A0F8V515 | A0A0F8URR8 | Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. | APH domain-containing protein. | 0.513 |
ARAM_003810 | ARAM_001045 | A0A0F8TXX7 | A0A0F8XP07 | RRM domain-containing protein. | RPA_C domain-containing protein. | 0.436 |
ARAM_003810 | ARAM_003201 | A0A0F8TXX7 | A0A0F8V895 | RRM domain-containing protein. | SH3 domain-containing protein. | 0.841 |
ARAM_003810 | ARAM_007715 | A0A0F8TXX7 | A0A0F8URR8 | RRM domain-containing protein. | APH domain-containing protein. | 0.503 |
ARAM_004002 | ARAM_002786 | A0A0F8VHX5 | A0A0F8WDK3 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 2Fe-2S iron-sulfur cluster binding domain protein. | 0.847 |
ARAM_004002 | ARAM_006187 | A0A0F8VHX5 | A0A0F8V6R7 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.516 |
ARAM_004002 | ARAM_007715 | A0A0F8VHX5 | A0A0F8URR8 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | APH domain-containing protein. | 0.497 |
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