STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARAM_00564526S proteasome regulatory subunit S5A. (282 aa)    
Predicted Functional Partners:
ARAM_004221
Putative 26S proteasome regulatory particle subunit Rpn8.
   
 0.999
ARAM_000413
PCI domain-containing protein.
   
 0.999
ARAM_004018
Putative proteasome regulatory particle subunit (RpnL).
   
 0.999
ARAM_002076
Putative proteasome regulatory particle subunit Rpt6; Belongs to the AAA ATPase family.
   
 0.999
ARAM_004918
PCI domain-containing protein.
   
 0.999
ARAM_003904
Putative proteasome regulatory particle subunit Rpt2; Belongs to the AAA ATPase family.
   
 0.999
ARAM_004954
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.999
ARAM_006406
Putative proteasome regulatory particle subunit (RpnI).
   
 0.999
ARAM_002530
26S protease regulatory subunit 6A-B; Belongs to the AAA ATPase family.
   
 0.999
ARAM_005219
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.999
Your Current Organism:
Aspergillus rambellii
NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580
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