STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARAM_006416Ribosome biogenesis protein. (594 aa)    
Predicted Functional Partners:
ARAM_001664
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.991
ARAM_003138
Uncharacterized protein.
   
 0.966
ARAM_004999
Putative ribonuclease P complex subunit Pop1.
   
  0.965
ARAM_003462
Putative ribonuclease P complex subunit Pop2.
   
  0.959
ARAM_002000
Ribonuclease P protein subunit.
   
  0.957
ARAM_002333
Uncharacterized protein.
   
 0.954
ARAM_006832
Uncharacterized protein.
   
  0.930
ARAM_005511
Uncharacterized protein.
   
  0.917
ARAM_005091
Uncharacterized protein.
    
  0.916
ARAM_000934
Uncharacterized protein.
   
 
 0.910
Your Current Organism:
Aspergillus rambellii
NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580
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