STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARAM_005357Uncharacterized protein. (642 aa)    
Predicted Functional Partners:
ARAM_003502
Transcriptional activator spt7.
    
 
 0.976
ARAM_007134
S-adenosylmethionine decarboxylase proenzyme.
    
 
 0.922
ARAM_004589
Transcription initiation factor TFIID subunit.
    
 
 0.914
ARAM_007448
Transcription-associated protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.910
ARAM_005842
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 
 0.894
ARAM_005669
Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family.
    
 
 0.887
ARAM_007156
TFIID_20kDa domain-containing protein.
    
 
 0.881
ARAM_005563
Putative SAGA-like transcriptional regulatory complex subunit Spt3.
    
 
 0.881
ARAM_001781
TATA-box binding protein.
    
 
 0.877
ARAM_000868
Uncharacterized protein.
    
 
 0.877
Your Current Organism:
Aspergillus rambellii
NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580
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