STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARAM_006474C2H2 finger domain protein. (282 aa)    
Predicted Functional Partners:
ARAM_006738
Uncharacterized protein.
    
 0.755
ARAM_000640
Nitrate reductase.
    
  0.695
ARAM_004646
RNA polymerase III transcription factor TFIIIC subunit (Tfc4).
    
 0.614
ARAM_004141
Uncharacterized protein.
    
 0.610
ARAM_000948
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.603
ARAM_000710
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.603
ARAM_006282
Uncharacterized protein.
    
 0.602
ARAM_006614
Uncharacterized protein.
    
 0.602
ARAM_001615
Mitochondrial 37S ribosomal protein.
    
  0.601
ARAM_003950
Mitochondrial 37S ribosomal protein.
   
  0.600
Your Current Organism:
Aspergillus rambellii
NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580
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