STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARAM_004141Uncharacterized protein. (1469 aa)    
Predicted Functional Partners:
ARAM_000849
Putative chromatin assembly factor 1 subunit C.
   
 0.976
ARAM_005810
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.940
ARAM_006691
Hist_deacetyl domain-containing protein.
   
 0.940
ARAM_006319
ENDO3c domain-containing protein.
    
 0.937
ARAM_004542
Chromo domain-containing protein.
    
 0.875
ARAM_003862
Uncharacterized protein.
   
 0.858
ARAM_001211
Chromo domain-containing protein.
    
 0.854
ARAM_002707
Uncharacterized protein.
    
 0.794
ARAM_001925
Uncharacterized protein.
    
 0.759
ARAM_006356
Amino_oxidase domain-containing protein.
    
 0.759
Your Current Organism:
Aspergillus rambellii
NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.