STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARAM_007335Pectinesterase; Involved in maceration and soft-rotting of plant tissue. (328 aa)    
Predicted Functional Partners:
ARAM_006001
Uncharacterized protein.
    
   0.779
ARAM_002548
Elongation factor 3.
    
   0.772
ARAM_005252
Uncharacterized protein.
 
  
  0.765
ARAM_004032
RNA export mediator Gle1.
    
  0.734
ARAM_001733
Endopolygalacturonase C.
     
 0.720
ARAM_004854
Endopolygalacturonase C.
     
 0.720
ARAM_003499
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
    
 0.715
ARAM_001114
Pectinesterase; Involved in maceration and soft-rotting of plant tissue. Belongs to the glycosyl hydrolase 28 family.
  
  
0.690
ARAM_000090
Uncharacterized protein.
    
  0.673
ARAM_000696
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.671
Your Current Organism:
Aspergillus rambellii
NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.