Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARAM_001064 | ARAM_001634 | A0A0F8WI40 | A0A0F8X456 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | DNA_binding_1 domain-containing protein. | 0.510 |
ARAM_001064 | ARAM_002372 | A0A0F8WI40 | A0A0F8V4Y4 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | DNA N-glycosylase. | 0.665 |
ARAM_001064 | ARAM_005045 | A0A0F8WI40 | A0A0F8UTC2 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | DNA_mis_repair domain-containing protein. | 0.991 |
ARAM_001064 | ARAM_006438 | A0A0F8WI40 | A0A0F8UXS4 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | Uncharacterized protein. | 0.960 |
ARAM_001064 | ARAM_007275 | A0A0F8WI40 | A0A0F8UE28 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.999 |
ARAM_001091 | ARAM_001634 | A0A0F8UCZ5 | A0A0F8X456 | Ubiquitin-protein. | DNA_binding_1 domain-containing protein. | 0.546 |
ARAM_001634 | ARAM_001064 | A0A0F8X456 | A0A0F8WI40 | DNA_binding_1 domain-containing protein. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.510 |
ARAM_001634 | ARAM_001091 | A0A0F8X456 | A0A0F8UCZ5 | DNA_binding_1 domain-containing protein. | Ubiquitin-protein. | 0.546 |
ARAM_001634 | ARAM_002219 | A0A0F8X456 | A0A0F8XFM8 | DNA_binding_1 domain-containing protein. | Fe2OG dioxygenase domain-containing protein. | 0.411 |
ARAM_001634 | ARAM_002372 | A0A0F8X456 | A0A0F8V4Y4 | DNA_binding_1 domain-containing protein. | DNA N-glycosylase. | 0.531 |
ARAM_001634 | ARAM_002814 | A0A0F8X456 | A0A0F8VVD1 | DNA_binding_1 domain-containing protein. | HTH araC/xylS-type domain-containing protein. | 0.522 |
ARAM_001634 | ARAM_003410 | A0A0F8X456 | A0A0F8UBQ1 | DNA_binding_1 domain-containing protein. | Fe2OG dioxygenase domain-containing protein. | 0.585 |
ARAM_001634 | ARAM_005045 | A0A0F8X456 | A0A0F8UTC2 | DNA_binding_1 domain-containing protein. | DNA_mis_repair domain-containing protein. | 0.514 |
ARAM_001634 | ARAM_006438 | A0A0F8X456 | A0A0F8UXS4 | DNA_binding_1 domain-containing protein. | Uncharacterized protein. | 0.493 |
ARAM_001634 | ARAM_007275 | A0A0F8X456 | A0A0F8UE28 | DNA_binding_1 domain-containing protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.437 |
ARAM_001634 | ARAM_007572 | A0A0F8X456 | A0A0F8UP62 | DNA_binding_1 domain-containing protein. | ENDO3c domain-containing protein. | 0.667 |
ARAM_002219 | ARAM_001634 | A0A0F8XFM8 | A0A0F8X456 | Fe2OG dioxygenase domain-containing protein. | DNA_binding_1 domain-containing protein. | 0.411 |
ARAM_002219 | ARAM_003410 | A0A0F8XFM8 | A0A0F8UBQ1 | Fe2OG dioxygenase domain-containing protein. | Fe2OG dioxygenase domain-containing protein. | 0.554 |
ARAM_002372 | ARAM_001064 | A0A0F8V4Y4 | A0A0F8WI40 | DNA N-glycosylase. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.665 |
ARAM_002372 | ARAM_001634 | A0A0F8V4Y4 | A0A0F8X456 | DNA N-glycosylase. | DNA_binding_1 domain-containing protein. | 0.531 |
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