STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARAM_001634DNA_binding_1 domain-containing protein. (210 aa)    
Predicted Functional Partners:
ARAM_007572
ENDO3c domain-containing protein.
  
 
 0.667
ARAM_003410
Fe2OG dioxygenase domain-containing protein.
  
  
 0.585
ARAM_001091
Ubiquitin-protein.
    
 
 0.546
ARAM_002372
DNA N-glycosylase.
  
 
 0.531
ARAM_002814
HTH araC/xylS-type domain-containing protein.
      
 0.522
ARAM_005045
DNA_mis_repair domain-containing protein.
   
 
 0.514
ARAM_001064
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 
 0.510
ARAM_006438
Uncharacterized protein.
   
 
 0.493
ARAM_007275
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 
 0.437
ARAM_002219
Fe2OG dioxygenase domain-containing protein.
  
  
 0.411
Your Current Organism:
Aspergillus rambellii
NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580
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