STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARAM_000691VPS9 domain protein. (1477 aa)    
Predicted Functional Partners:
ARAM_006732
Uncharacterized protein.
    
 0.696
ARAM_003097
Ankyrin repeat protein.
    
 0.667
ARAM_004039
Uncharacterized protein.
    
 0.638
ARAM_004264
Serine/threonine-protein phosphatase.
    
  0.611
ARAM_006738
Uncharacterized protein.
    
 0.599
ARAM_001469
UBA domain-containing protein.
    
 0.596
ARAM_003254
AN1-type domain-containing protein.
   
 0.596
ARAM_007458
3'-5' exonuclease domain-containing protein.
    
  0.593
ARAM_005074
SUMO-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.581
ARAM_000302
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  0.579
Your Current Organism:
Aspergillus rambellii
NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.