STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARAM_006632zf-C3H1 domain-containing protein. (1237 aa)    
Predicted Functional Partners:
ARAM_006755
Putative ATP dependent RNA helicase (Dob1).
    
 
 0.938
ARAM_004833
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.933
ARAM_000028
Uncharacterized protein.
    
 
 0.825
ARAM_000027
Importin N-terminal domain-containing protein.
    
 
 0.813
ARAM_001410
Uncharacterized protein.
    
 
 0.813
ARAM_003324
Uncharacterized protein.
   
 
 0.811
ARAM_005657
SF3b1 domain-containing protein.
   
    0.645
ARAM_007625
Exosome component 3'-5' exonuclease.
   
 
 0.637
ARAM_001478
Arsenite resistance protein.
    
 
 0.612
ARAM_000496
Uncharacterized protein.
    
 
 0.547
Your Current Organism:
Aspergillus rambellii
NCBI taxonomy Id: 308745
Other names: A. rambellii, ATCC 42001, CBS 101887, IBT 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.