STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARC87136.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)    
Predicted Functional Partners:
ARC87135.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.872
ARC87137.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
ARC87134.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.711
ARC89218.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.690
ARC87132.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.689
ARC87138.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.686
ARC87131.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.608
ARC87133.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S14 family.
 
    0.595
ARC89216.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.593
ARC87142.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.560
Your Current Organism:
Rhodovulum sp. MB263
NCBI taxonomy Id: 308754
Other names: R. sp. MB263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.