STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARC88565.1OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)    
Predicted Functional Partners:
ARC88567.1
Ureidoglycolate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.975
ARC88564.1
Hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
  
 0.963
ARC89897.1
Asp/Glu/hydantoin racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.945
ARC88031.1
Hydrogenase expression protein HupH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.942
ARC88562.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.890
ARC88566.1
(S)-ureidoglycine aminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.889
ARC88568.1
Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.864
ARC87732.1
Xanthine dehydrogenase molybdopterin binding subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.830
ARC87733.1
Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.828
ARC87731.1
Xanthine dehydrogenase accessory protein XdhC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.781
Your Current Organism:
Rhodovulum sp. MB263
NCBI taxonomy Id: 308754
Other names: R. sp. MB263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.