STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARC88570.1A alpha-helical domain with a conserved ER moti; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)    
Predicted Functional Partners:
ARC88569.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.991
ARC88571.1
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.967
ARC88572.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.957
ARC88196.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.905
ARC88197.1
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.855
B5V46_12865
ATP-binding protein; Frameshifted; incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.814
ARC89435.1
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.687
ARC88195.1
IMP dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.632
ARC88568.1
Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.445
Your Current Organism:
Rhodovulum sp. MB263
NCBI taxonomy Id: 308754
Other names: R. sp. MB263
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.