STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARC88611.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)    
Predicted Functional Partners:
ARC88610.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.975
ARC88609.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.956
ARC88612.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.948
ARC88614.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.925
ARC88616.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.922
ARC88615.1
Virulence factor SrfB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.916
ARC88617.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.891
ARC88613.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.808
ARC88618.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.782
ARC88714.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.699
Your Current Organism:
Rhodovulum sp. MB263
NCBI taxonomy Id: 308754
Other names: R. sp. MB263
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.