STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383V3C8Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (1243 aa)    
Predicted Functional Partners:
A0A383WGI0
EF-hand domain-containing protein.
   
 
 0.953
A0A383V6A1
Uncharacterized protein.
   
 0.943
A0A383WDY7
Uncharacterized protein.
   
 0.943
A0A383W8I3
Uncharacterized protein.
    
   0.792
A0A383V6Q2
Uncharacterized protein.
    
 
 0.709
A0A383VGK3
Uncharacterized protein.
    
 
 0.696
A0A383WDX9
Uncharacterized protein.
    
 
 0.671
A0A383WQB7
Uncharacterized protein.
    
 
 0.641
A0A383VF55
Uncharacterized protein.
    
 
 0.633
A0A383V4M4
Uncharacterized protein.
    
   0.614
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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