STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383V5Q9UBIQUITIN_CONJUGAT_2 domain-containing protein. (154 aa)    
Predicted Functional Partners:
A0A383VLD0
Uncharacterized protein.
    
 0.994
A0A383V458
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.960
A0A383WKB6
Uncharacterized protein.
    
 0.955
A0A383V8P2
E3 ubiquitin protein ligase.
    
 0.951
A0A383V5M4
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
    
 0.948
A0A383V5E6
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.940
A0A383VW15
Ubiquitin-like domain-containing protein.
    
 0.918
A0A383WLA8
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.866
A0A383W6D8
Uncharacterized protein.
    
 0.836
A0A383W4I4
Uncharacterized protein.
    
 0.800
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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