STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383V779Uncharacterized protein. (250 aa)    
Predicted Functional Partners:
A0A383VLD0
Uncharacterized protein.
   
 0.989
A0A383VM53
Uncharacterized protein.
   
 0.984
A0A383VY00
Uncharacterized protein.
   
 0.983
A0A383V6T0
Uncharacterized protein.
   
 0.958
A0A383V7X8
TPR_REGION domain-containing protein.
   
 0.955
A0A383VWB8
Uncharacterized protein.
   
 0.954
A0A383W8F6
S1 motif domain-containing protein.
   
 
 0.921
A0A383WJD9
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 
 0.915
A0A383WE56
TFIIS N-terminal domain-containing protein.
   
 
 0.896
A0A383VBZ8
RPOLD domain-containing protein.
    
 
 0.891
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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