STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383VGD4Vps39_2 domain-containing protein. (1467 aa)    
Predicted Functional Partners:
A0A383W163
Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.
   
 0.940
A0A383WQD7
Pep3_Vps18 domain-containing protein.
   
 0.939
A0A383WHV3
Uncharacterized protein.
   
 0.930
A0A383WGD3
Laminin EGF-like domain-containing protein.
   
 0.927
A0A383V6D1
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.830
A0A383VIL7
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.830
A0A383WNL0
Uncharacterized protein.
    
 
 0.724
A0A383VAH6
Uncharacterized protein.
   
 
 0.711
A0A383W5I4
Vps8 domain-containing protein.
   
 
 0.711
A0A383VR47
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.706
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.