STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383VIP1eRF1_1 domain-containing protein. (440 aa)    
Predicted Functional Partners:
A0A383VV61
Tr-type G domain-containing protein.
   
 0.999
A0A383W8N0
Uncharacterized protein.
   
 
 0.994
A0A383W276
Tr-type G domain-containing protein.
   
 0.975
A0A383VTV7
KH type-2 domain-containing protein.
   
 0.897
A0A383VHR6
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
  0.895
A0A383VW15
Ubiquitin-like domain-containing protein.
   
  0.895
A0A383V4S5
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.879
A0A383VZK9
Ribosomal_L2_C domain-containing protein.
   
 0.875
A0A383VYN1
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.860
A0A383VN11
UPF0020 domain-containing protein.
    
 0.849
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.