Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A383V6L8 | A0A383VQD7 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | CS domain-containing protein. | 0.635 |
A0A383V6L8 | A0A383VV17 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | BUB1 N-terminal domain-containing protein. | 0.655 |
A0A383V6L8 | A0A383VVR1 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | Protein kinase domain-containing protein. | 0.633 |
A0A383V6L8 | A0A383W5E4 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.630 |
A0A383VQD7 | A0A383V6L8 | CS domain-containing protein. | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | 0.635 |
A0A383VQD7 | A0A383VT43 | CS domain-containing protein. | Uncharacterized protein. | 0.751 |
A0A383VQD7 | A0A383VV17 | CS domain-containing protein. | BUB1 N-terminal domain-containing protein. | 0.673 |
A0A383VQD7 | A0A383VVR1 | CS domain-containing protein. | Protein kinase domain-containing protein. | 0.681 |
A0A383VQD7 | A0A383VWA0 | CS domain-containing protein. | Uncharacterized protein. | 0.643 |
A0A383VQD7 | A0A383VZI7 | CS domain-containing protein. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.623 |
A0A383VQD7 | A0A383W2L4 | CS domain-containing protein. | Uncharacterized protein. | 0.673 |
A0A383VQD7 | A0A383W5E4 | CS domain-containing protein. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.620 |
A0A383VQD7 | A0A383W7W9 | CS domain-containing protein. | Uncharacterized protein. | 0.621 |
A0A383VQD7 | A0A383W823 | CS domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.751 |
A0A383VT43 | A0A383VQD7 | Uncharacterized protein. | CS domain-containing protein. | 0.751 |
A0A383VT43 | A0A383VV17 | Uncharacterized protein. | BUB1 N-terminal domain-containing protein. | 0.628 |
A0A383VT43 | A0A383VVR1 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.648 |
A0A383VV17 | A0A383V6L8 | BUB1 N-terminal domain-containing protein. | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | 0.655 |
A0A383VV17 | A0A383VQD7 | BUB1 N-terminal domain-containing protein. | CS domain-containing protein. | 0.673 |
A0A383VV17 | A0A383VT43 | BUB1 N-terminal domain-containing protein. | Uncharacterized protein. | 0.628 |
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