STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383VRV5Uncharacterized protein. (313 aa)    
Predicted Functional Partners:
A0A383V9R3
Uncharacterized protein.
  
 
 0.831
A0A383WIZ6
Uncharacterized protein.
  
 
 0.806
A0A383V8R1
Uncharacterized protein.
   
 
 0.742
A0A383WB01
Uncharacterized protein.
  
  
 0.728
A0A383VPT4
C2 domain-containing protein.
    
 
 0.604
A0A383VLW8
Ig-like domain-containing protein.
    
 
 0.588
A0A383WL38
Uncharacterized protein.
   
  
 0.512
A0A383VE94
Uncharacterized protein.
      
 0.499
A0A383V3T9
C2-C2_1 domain-containing protein.
      
 0.463
A0A383W4U6
Uncharacterized protein.
      
 0.459
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.