STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383VUJ0Uncharacterized protein. (1558 aa)    
Predicted Functional Partners:
A0A383W519
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.917
A0A383VAW0
Uncharacterized protein.
    
 0.916
A0A383VBZ8
RPOLD domain-containing protein.
    
  0.882
A0A383WIJ4
RPOL4c domain-containing protein.
    
 0.882
A0A383VZ64
Uncharacterized protein.
    
 0.865
A0A383W220
Protein kinase domain-containing protein.
    
 0.865
A0A383VV07
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
  0.861
A0A383W7Y2
Uncharacterized protein.
    
  0.861
A0A383V481
Uncharacterized protein.
    
  0.859
A0A383VZG3
RNA_pol_L_2 domain-containing protein.
    
  0.845
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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