STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383VW40Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. (297 aa)    
Predicted Functional Partners:
A0A383V9E2
Ribosomal_L2_C domain-containing protein.
 
 0.996
A0A383W1E1
Uncharacterized protein.
 
 
 0.990
A0A383WAL4
Uncharacterized protein.
  
 
 0.990
A0A383WL95
Uncharacterized protein.
 
 
 0.990
A0A383VHT9
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.989
A0A383WLN8
Uncharacterized protein.
   
 0.989
A0A383VMG3
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
   
 0.987
A0A383WHR6
Ribosomal_L5_C domain-containing protein.
  
 0.987
A0A383V9G4
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 0.985
A0A383VA88
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
  
 
 0.985
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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