STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383VXA2Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (517 aa)    
Predicted Functional Partners:
A0A383VNN5
PCI domain-containing protein.
   
 0.982
A0A383WAD1
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.976
A0A383V813
VWFA domain-containing protein.
   
 0.974
A0A383VH16
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.974
A0A383VR96
MPN domain-containing protein.
   
 0.974
A0A383WDE5
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.974
A0A383V7X9
PCI domain-containing protein.
   
 0.972
A0A383VQE7
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.972
A0A383W8G1
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.971
A0A383WNU4
PCI domain-containing protein.
   
 0.971
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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