A0A383VZW9 protein (Tetradesmus obliquus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A383VZW9

Uncharacterized protein. (358 aa)

Predicted Functional Partners:

A0A383VHI8

0.915

A0A383VKT6

0.915

A0A383VLI4

0.915

BQ4739_LOCUS66

0.875

BQ4739_LOCUS67

0.875

A0A383VCW7

0.875

A0A383VAF7

0.821

A0A383VRT2

0.821

A0A383WN54

0.821

A0A383VEL4

0.805

Your Current Organism:

Tetradesmus obliquus

NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A383VAF7	A0A383VZW9	A0A383VAF7	A0A383VZW9	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Uncharacterized protein.	0.821
A0A383VCW7	A0A383VZW9	A0A383VCW7	A0A383VZW9	Uncharacterized protein.	Uncharacterized protein.	0.875
A0A383VEL4	A0A383VHI8	A0A383VEL4	A0A383VHI8	Uncharacterized protein.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.597
A0A383VEL4	A0A383VKT6	A0A383VEL4	A0A383VKT6	Uncharacterized protein.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.597
A0A383VEL4	A0A383VLI4	A0A383VEL4	A0A383VLI4	Uncharacterized protein.	Uncharacterized protein.	0.597
A0A383VEL4	A0A383VZW9	A0A383VEL4	A0A383VZW9	Uncharacterized protein.	Uncharacterized protein.	0.805
A0A383VHI8	A0A383VEL4	A0A383VHI8	A0A383VEL4	Uncharacterized protein; Belongs to the MT-A70-like family.	Uncharacterized protein.	0.597
A0A383VHI8	A0A383VZW9	A0A383VHI8	A0A383VZW9	Uncharacterized protein; Belongs to the MT-A70-like family.	Uncharacterized protein.	0.915
A0A383VKT6	A0A383VEL4	A0A383VKT6	A0A383VEL4	Uncharacterized protein; Belongs to the MT-A70-like family.	Uncharacterized protein.	0.597
A0A383VKT6	A0A383VZW9	A0A383VKT6	A0A383VZW9	Uncharacterized protein; Belongs to the MT-A70-like family.	Uncharacterized protein.	0.915
A0A383VLI4	A0A383VEL4	A0A383VLI4	A0A383VEL4	Uncharacterized protein.	Uncharacterized protein.	0.597
A0A383VLI4	A0A383VZW9	A0A383VLI4	A0A383VZW9	Uncharacterized protein.	Uncharacterized protein.	0.915
A0A383VRT2	A0A383VZW9	A0A383VRT2	A0A383VZW9	Uncharacterized protein.	Uncharacterized protein.	0.821
A0A383VZW9	A0A383VAF7	A0A383VZW9	A0A383VAF7	Uncharacterized protein.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.821
A0A383VZW9	A0A383VCW7	A0A383VZW9	A0A383VCW7	Uncharacterized protein.	Uncharacterized protein.	0.875
A0A383VZW9	A0A383VEL4	A0A383VZW9	A0A383VEL4	Uncharacterized protein.	Uncharacterized protein.	0.805
A0A383VZW9	A0A383VHI8	A0A383VZW9	A0A383VHI8	Uncharacterized protein.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.915
A0A383VZW9	A0A383VKT6	A0A383VZW9	A0A383VKT6	Uncharacterized protein.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.915
A0A383VZW9	A0A383VLI4	A0A383VZW9	A0A383VLI4	Uncharacterized protein.	Uncharacterized protein.	0.915
A0A383VZW9	A0A383VRT2	A0A383VZW9	A0A383VRT2	Uncharacterized protein.	Uncharacterized protein.	0.821

page 1 of 2

Server load: low (26%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About