STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383W1D7MI domain-containing protein. (1047 aa)    
Predicted Functional Partners:
A0A383WGJ3
WD_REPEATS_REGION domain-containing protein.
   
   0.974
A0A383VBI1
KH_8 domain-containing protein.
   
 
 0.971
A0A383W5B8
Sas10 domain-containing protein.
   
 
 0.967
A0A383WMN0
NUC153 domain-containing protein.
  
   0.965
A0A383VD10
Uncharacterized protein.
   
 
 0.961
A0A383WH76
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.958
A0A383VGH6
CBF domain-containing protein.
   
   0.957
A0A383W6Z7
WD_REPEATS_REGION domain-containing protein.
   
   0.953
A0A383V7Q6
Uncharacterized protein.
   
   0.952
A0A383WBR4
Uncharacterized protein.
   
   0.948
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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