STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383W8X5Uncharacterized protein. (491 aa)    
Predicted Functional Partners:
A0A383V4K1
Uncharacterized protein.
    
 0.705
A0A383WCT8
Isocitrate lyase.
    
 0.705
A0A383WFB8
Uncharacterized protein.
    
 0.705
A0A383VSG4
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.695
A0A383V6G6
ETF domain-containing protein.
    
  0.671
A0A383WD85
ETF domain-containing protein.
    
  0.660
A0A383VNY1
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
     
 0.609
A0A383V729
4HBT domain-containing protein.
     
 0.601
A0A383VFX8
4HBT domain-containing protein.
     
 0.601
A0A383VKK0
Uncharacterized protein.
  
 
 0.587
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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