STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383W912RRM domain-containing protein. (453 aa)    
Predicted Functional Partners:
A0A383VEL5
HAUS-augmin3 domain-containing protein.
   
 0.964
A0A383V243
Uncharacterized protein.
   
 0.953
A0A383W6Y3
Uncharacterized protein.
   
 0.916
A0A383VRP0
t-SNARE coiled-coil homology domain-containing protein.
    
 0.892
A0A383W685
Sm domain-containing protein.
    
 0.890
A0A383VF15
Uncharacterized protein.
    
  0.835
A0A383VNG3
SNRNP27 domain-containing protein.
    
  0.834
A0A383WPX9
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
  0.828
A0A383VHN1
Nop domain-containing protein.
   
 0.823
A0A383VBS2
Uncharacterized protein.
    
  0.810
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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