Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A383V435 | A0A383WAF9 | RF_PROK_I domain-containing protein. | UPF0020 domain-containing protein. | 0.802 |
A0A383V9U9 | A0A383WAF9 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | UPF0020 domain-containing protein. | 0.712 |
A0A383VAD9 | A0A383WAF9 | RF_PROK_I domain-containing protein. | UPF0020 domain-containing protein. | 0.802 |
A0A383VIP1 | A0A383VV61 | eRF1_1 domain-containing protein. | Tr-type G domain-containing protein. | 0.999 |
A0A383VIP1 | A0A383VWC2 | eRF1_1 domain-containing protein. | Uncharacterized protein. | 0.824 |
A0A383VIP1 | A0A383WAF9 | eRF1_1 domain-containing protein. | UPF0020 domain-containing protein. | 0.763 |
A0A383VT56 | A0A383WAF9 | Fe-S_biosyn domain-containing protein. | UPF0020 domain-containing protein. | 0.802 |
A0A383VV61 | A0A383VIP1 | Tr-type G domain-containing protein. | eRF1_1 domain-containing protein. | 0.999 |
A0A383VV61 | A0A383VWC2 | Tr-type G domain-containing protein. | Uncharacterized protein. | 0.666 |
A0A383VV61 | A0A383WAF9 | Tr-type G domain-containing protein. | UPF0020 domain-containing protein. | 0.645 |
A0A383VWC2 | A0A383VIP1 | Uncharacterized protein. | eRF1_1 domain-containing protein. | 0.824 |
A0A383VWC2 | A0A383VV61 | Uncharacterized protein. | Tr-type G domain-containing protein. | 0.666 |
A0A383VWC2 | A0A383WAF9 | Uncharacterized protein. | UPF0020 domain-containing protein. | 0.953 |
A0A383W1M1 | A0A383WAF9 | Uncharacterized protein. | UPF0020 domain-containing protein. | 0.802 |
A0A383W3Y0 | A0A383WAF9 | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. | UPF0020 domain-containing protein. | 0.738 |
A0A383W472 | A0A383WAF9 | RF_PROK_I domain-containing protein. | UPF0020 domain-containing protein. | 0.802 |
A0A383WAF9 | A0A383V435 | UPF0020 domain-containing protein. | RF_PROK_I domain-containing protein. | 0.802 |
A0A383WAF9 | A0A383V9U9 | UPF0020 domain-containing protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.712 |
A0A383WAF9 | A0A383VAD9 | UPF0020 domain-containing protein. | RF_PROK_I domain-containing protein. | 0.802 |
A0A383WAF9 | A0A383VIP1 | UPF0020 domain-containing protein. | eRF1_1 domain-containing protein. | 0.763 |
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