STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383WEM0GATA-type domain-containing protein. (633 aa)    
Predicted Functional Partners:
A0A383WN25
Uncharacterized protein.
    
 0.601
GATA
Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).
      
 0.474
A0A383WD69
Histone H2A; Belongs to the histone H2A family.
    
 0.463
A0A383W6V0
Uncharacterized protein.
    
 0.452
A0A383WHK7
SHR-BD domain-containing protein.
    
 0.421
A0A383VX62
PHD-type domain-containing protein.
    
 0.420
A0A383VN75
MADS-box domain-containing protein.
    
 0.418
A0A383VQB3
Uncharacterized protein.
    
 0.408
A0A383WNS6
DUF4821 domain-containing protein.
    
 0.408
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.