STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383WGB0FCP1 homology domain-containing protein. (452 aa)    
Predicted Functional Partners:
A0A383W220
Protein kinase domain-containing protein.
    
 0.730
A0A383WIJ4
RPOL4c domain-containing protein.
    
 0.724
A0A383VMN5
Uncharacterized protein.
    
 0.721
A0A383W5W3
Uncharacterized protein.
    
 0.706
A0A383VZG3
RNA_pol_L_2 domain-containing protein.
    
  0.690
A0A383VZ64
Uncharacterized protein.
   
 0.683
A0A383W7Y2
Uncharacterized protein.
   
  0.681
A0A383W8K9
Uncharacterized protein.
    
 0.673
A0A383WJD9
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.662
A0A383WC79
Protein kinase domain-containing protein.
    
 0.659
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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