STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383WII2Ubiquitin carboxyl-terminal hydrolase. (370 aa)    
Predicted Functional Partners:
A0A383WEB7
RPN13_C domain-containing protein.
   
 0.985
A0A383V813
VWFA domain-containing protein.
    
 0.983
A0A383WIP6
PCI domain-containing protein.
   
 0.962
A0A383VR96
MPN domain-containing protein.
   
 0.961
A0A383VRS8
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.961
A0A383WNU4
PCI domain-containing protein.
   
 0.955
A0A383VH16
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.954
A0A383VNN5
PCI domain-containing protein.
   
 0.954
A0A383VNU1
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
   
 0.954
A0A383WAD1
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.954
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.