STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR60005.1Thiamine transport system substrate-binding protein. (361 aa)    
Predicted Functional Partners:
SIR60023.1
Thiamine transport system permease protein.
 
 
 0.980
SIR60044.1
Thiamine transport system ATP-binding protein.
    
  0.975
SIR93506.1
Thiamine transport system substrate-binding protein.
  
  
 
0.909
SIR93415.1
iron(III) transport system permease protein.
 
 
 0.650
SIR59971.1
Hypothetical protein.
       0.501
SIR59986.1
Predicted P-loop ATPase/GTPase.
       0.501
SIR81433.1
Molybdate transport system regulatory protein.
    
  0.407
Your Current Organism:
Natronorubrum thiooxidans
NCBI taxonomy Id: 308853
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.