STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR61986.1Carbohydrate ABC transporter ATP-binding protein, CUT1 family. (400 aa)    
Predicted Functional Partners:
SIR62000.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  
 0.994
SIR62028.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  
 0.975
SIR62012.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  
 0.948
SIR84526.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family.
  
  
 
0.907
SIR87090.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  
 0.868
SIR87076.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  
  0.849
SIR61970.1
Hypothetical protein.
       0.795
SIR84542.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.793
SIR84576.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  
 0.792
SIS15252.1
Molybdate/tungstate transport system permease protein.
  
  0.758
Your Current Organism:
Natronorubrum thiooxidans
NCBI taxonomy Id: 308853
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.