STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR73615.1Flagellar protein FlaJ. (685 aa)    
Predicted Functional Partners:
SIR73603.1
Flagellar protein FlaI.
 
  
 0.992
SIR73628.1
Hypothetical protein.
       0.819
SIR73645.1
Hypothetical protein.
       0.819
SIR73660.1
Hypothetical protein.
       0.819
SIR73675.1
Hypothetical protein.
       0.819
SIR73688.1
Hypothetical protein.
       0.819
SIS01082.1
Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase.
 
  
 0.754
SIR89633.1
Hypothetical protein.
  
     0.724
SIS10268.1
Preflagellin peptidase FlaK.
 
   
 0.718
SIS14705.1
Flagellin N-terminal-like domain-containing protein.
  
   
 0.718
Your Current Organism:
Natronorubrum thiooxidans
NCBI taxonomy Id: 308853
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.