Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIR57110.1 | SIR74037.1 | SAMN05421752_10141 | SAMN05421752_102186 | Citrate synthase. | Acetyl-coenzyme A synthetase. | 0.964 |
SIR57110.1 | SIR87821.1 | SAMN05421752_10141 | SAMN05421752_104133 | Citrate synthase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.926 |
SIR57110.1 | SIR89013.1 | SAMN05421752_10141 | SAMN05421752_104237 | Citrate synthase. | Acetyltransferase. | 0.811 |
SIR57110.1 | SIS03873.1 | SAMN05421752_10141 | SAMN05421752_108101 | Citrate synthase. | 2-isopropylmalate synthase. | 0.571 |
SIR57110.1 | SIS05754.1 | SAMN05421752_10141 | SAMN05421752_10944 | Citrate synthase. | Pyruvate ferredoxin oxidoreductase alpha subunit. | 0.926 |
SIR57110.1 | SIS10987.1 | SAMN05421752_10141 | SAMN05421752_111142 | Citrate synthase. | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase). | 0.991 |
SIR57110.1 | SIS15162.1 | SAMN05421752_10141 | SAMN05421752_114109 | Citrate synthase. | Acetyltransferase. | 0.811 |
SIR57110.1 | SIS17306.1 | SAMN05421752_10141 | SAMN05421752_11737 | Citrate synthase. | succinyl-CoA:acetate CoA-transferase. | 0.889 |
SIR57110.1 | SIS17370.1 | SAMN05421752_10141 | SAMN05421752_11748 | Citrate synthase. | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 0.613 |
SIR74037.1 | SIR57110.1 | SAMN05421752_102186 | SAMN05421752_10141 | Acetyl-coenzyme A synthetase. | Citrate synthase. | 0.964 |
SIR74037.1 | SIR87821.1 | SAMN05421752_102186 | SAMN05421752_104133 | Acetyl-coenzyme A synthetase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.914 |
SIR74037.1 | SIR89013.1 | SAMN05421752_102186 | SAMN05421752_104237 | Acetyl-coenzyme A synthetase. | Acetyltransferase. | 0.929 |
SIR74037.1 | SIS01226.1 | SAMN05421752_102186 | SAMN05421752_107111 | Acetyl-coenzyme A synthetase. | Propionate CoA-transferase. | 0.911 |
SIR74037.1 | SIS03873.1 | SAMN05421752_102186 | SAMN05421752_108101 | Acetyl-coenzyme A synthetase. | 2-isopropylmalate synthase. | 0.917 |
SIR74037.1 | SIS05754.1 | SAMN05421752_102186 | SAMN05421752_10944 | Acetyl-coenzyme A synthetase. | Pyruvate ferredoxin oxidoreductase alpha subunit. | 0.914 |
SIR74037.1 | SIS10987.1 | SAMN05421752_102186 | SAMN05421752_111142 | Acetyl-coenzyme A synthetase. | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase). | 0.923 |
SIR74037.1 | SIS15162.1 | SAMN05421752_102186 | SAMN05421752_114109 | Acetyl-coenzyme A synthetase. | Acetyltransferase. | 0.929 |
SIR74037.1 | SIS17306.1 | SAMN05421752_102186 | SAMN05421752_11737 | Acetyl-coenzyme A synthetase. | succinyl-CoA:acetate CoA-transferase. | 0.934 |
SIR74037.1 | SIS17370.1 | SAMN05421752_102186 | SAMN05421752_11748 | Acetyl-coenzyme A synthetase. | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 0.938 |
SIR87821.1 | SIR57110.1 | SAMN05421752_104133 | SAMN05421752_10141 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Citrate synthase. | 0.926 |
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