Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SIR71940.1 | SIR71951.1 | SAMN05421752_10249 | SAMN05421752_10250 | Hypothetical protein. | Diguanylate Cyclase and Two-component system sensory domain-containing protein. | 0.524 |
| SIR71940.1 | SIR71965.1 | SAMN05421752_10249 | SAMN05421752_10251 | Hypothetical protein. | Hypothetical protein. | 0.431 |
| SIR71951.1 | SIR71940.1 | SAMN05421752_10250 | SAMN05421752_10249 | Diguanylate Cyclase and Two-component system sensory domain-containing protein. | Hypothetical protein. | 0.524 |
| SIR71951.1 | SIR71965.1 | SAMN05421752_10250 | SAMN05421752_10251 | Diguanylate Cyclase and Two-component system sensory domain-containing protein. | Hypothetical protein. | 0.664 |
| SIR71951.1 | SIR71979.1 | SAMN05421752_10250 | SAMN05421752_10252 | Diguanylate Cyclase and Two-component system sensory domain-containing protein. | Acetyltransferase (GNAT) family protein. | 0.454 |
| SIR71965.1 | SIR71940.1 | SAMN05421752_10251 | SAMN05421752_10249 | Hypothetical protein. | Hypothetical protein. | 0.431 |
| SIR71965.1 | SIR71951.1 | SAMN05421752_10251 | SAMN05421752_10250 | Hypothetical protein. | Diguanylate Cyclase and Two-component system sensory domain-containing protein. | 0.664 |
| SIR71965.1 | SIR71979.1 | SAMN05421752_10251 | SAMN05421752_10252 | Hypothetical protein. | Acetyltransferase (GNAT) family protein. | 0.554 |
| SIR71965.1 | fen | SAMN05421752_10251 | SAMN05421752_10253 | Hypothetical protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] | 0.405 |
| SIR71979.1 | SIR71951.1 | SAMN05421752_10252 | SAMN05421752_10250 | Acetyltransferase (GNAT) family protein. | Diguanylate Cyclase and Two-component system sensory domain-containing protein. | 0.454 |
| SIR71979.1 | SIR71965.1 | SAMN05421752_10252 | SAMN05421752_10251 | Acetyltransferase (GNAT) family protein. | Hypothetical protein. | 0.554 |
| SIR71979.1 | fen | SAMN05421752_10252 | SAMN05421752_10253 | Acetyltransferase (GNAT) family protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] | 0.590 |
| fen | SIR71965.1 | SAMN05421752_10253 | SAMN05421752_10251 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] | Hypothetical protein. | 0.405 |
| fen | SIR71979.1 | SAMN05421752_10253 | SAMN05421752_10252 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] | Acetyltransferase (GNAT) family protein. | 0.590 |