Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIR72541.1 | SIR72555.1 | SAMN05421752_10292 | SAMN05421752_10293 | GTPase, G3E family. | Hypothetical protein. | 0.618 |
SIR72541.1 | SIR72567.1 | SAMN05421752_10292 | SAMN05421752_10294 | GTPase, G3E family. | Formate dehydrogenase major subunit. | 0.453 |
SIR72541.1 | SIR89052.1 | SAMN05421752_10292 | SAMN05421752_104240 | GTPase, G3E family. | Zinc transport system substrate-binding protein. | 0.538 |
SIR72541.1 | SIS12165.1 | SAMN05421752_10292 | SAMN05421752_11286 | GTPase, G3E family. | Zinc transport system substrate-binding protein. | 0.538 |
SIR72541.1 | map | SAMN05421752_10292 | SAMN05421752_11091 | GTPase, G3E family. | Methionine aminopeptidase, type II; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase archaeal type 2 subfamily. | 0.594 |
SIR72541.1 | mptA | SAMN05421752_10292 | SAMN05421752_11046 | GTPase, G3E family. | GTP cyclohydrolase MptA; Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin. | 0.585 |
SIR72541.1 | rps14 | SAMN05421752_10292 | SAMN05421752_10338 | GTPase, G3E family. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles. | 0.592 |
SIR72541.1 | rps14-2 | SAMN05421752_10292 | SAMN05421752_1258 | GTPase, G3E family. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles. Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily. | 0.592 |
SIR72555.1 | SIR72541.1 | SAMN05421752_10293 | SAMN05421752_10292 | Hypothetical protein. | GTPase, G3E family. | 0.618 |
SIR72555.1 | SIR72567.1 | SAMN05421752_10293 | SAMN05421752_10294 | Hypothetical protein. | Formate dehydrogenase major subunit. | 0.597 |
SIR72567.1 | SIR72541.1 | SAMN05421752_10294 | SAMN05421752_10292 | Formate dehydrogenase major subunit. | GTPase, G3E family. | 0.453 |
SIR72567.1 | SIR72555.1 | SAMN05421752_10294 | SAMN05421752_10293 | Formate dehydrogenase major subunit. | Hypothetical protein. | 0.597 |
SIR89052.1 | SIR72541.1 | SAMN05421752_104240 | SAMN05421752_10292 | Zinc transport system substrate-binding protein. | GTPase, G3E family. | 0.538 |
SIR89052.1 | SIS12165.1 | SAMN05421752_104240 | SAMN05421752_11286 | Zinc transport system substrate-binding protein. | Zinc transport system substrate-binding protein. | 0.925 |
SIR89052.1 | rps14 | SAMN05421752_104240 | SAMN05421752_10338 | Zinc transport system substrate-binding protein. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles. | 0.582 |
SIR89052.1 | rps14-2 | SAMN05421752_104240 | SAMN05421752_1258 | Zinc transport system substrate-binding protein. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles. Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily. | 0.582 |
SIS12165.1 | SIR72541.1 | SAMN05421752_11286 | SAMN05421752_10292 | Zinc transport system substrate-binding protein. | GTPase, G3E family. | 0.538 |
SIS12165.1 | SIR89052.1 | SAMN05421752_11286 | SAMN05421752_104240 | Zinc transport system substrate-binding protein. | Zinc transport system substrate-binding protein. | 0.925 |
SIS12165.1 | rps14 | SAMN05421752_11286 | SAMN05421752_10338 | Zinc transport system substrate-binding protein. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles. | 0.582 |
SIS12165.1 | rps14-2 | SAMN05421752_11286 | SAMN05421752_1258 | Zinc transport system substrate-binding protein. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles. Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily. | 0.582 |
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