STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
matMethionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP; Belongs to the AdoMet synthase 2 family. (401 aa)    
Predicted Functional Partners:
SIR62117.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
  
 0.967
SIR62131.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
  
 0.964
SIR88860.1
Adenylate cyclase.
 
     0.709
gap
Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+).
  
  
  0.622
SIR75422.1
Aspartate aminotransferase.
  
  
 0.602
SIR88867.1
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD.
 
    0.596
SIR88327.1
Putative transcriptional regulator.
  
     0.579
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
  
  0.553
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
  
  0.549
carS
CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
  
     0.493
Your Current Organism:
Natronorubrum thiooxidans
NCBI taxonomy Id: 308853
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