STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR89025.1Zinc transport system permease protein. (370 aa)    
Predicted Functional Partners:
SIR89052.1
Zinc transport system substrate-binding protein.
 
 
 0.999
SIR89037.1
Zinc transport system ATP-binding protein.
 
 0.997
SIS12171.1
Zinc transport system ATP-binding protein.
 
 0.985
SIS12165.1
Zinc transport system substrate-binding protein.
 
 
 0.974
SIR81385.1
Mn2+ and Fe2+ transporters of the NRAMP family.
   
  
 0.599
SIR98542.1
NRAMP (natural resistance-associated macrophage protein) metal ion transporters.
   
  
 0.599
SIR63121.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
 
   
 0.591
SIR89013.1
Acetyltransferase.
       0.567
SIR89003.1
Hypothetical protein.
       0.554
SIR89066.1
Hypothetical protein.
    
  0.529
Your Current Organism:
Natronorubrum thiooxidans
NCBI taxonomy Id: 308853
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.