STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR91613.1PAS domain-containing protein. (251 aa)    
Predicted Functional Partners:
SIR91601.1
Hypothetical protein.
       0.533
SIS18782.1
Predicted metal-dependent hydrolase.
  
     0.520
SIR82250.1
Cytochrome c oxidase assembly protein subunit 15.
  
     0.508
SIS12526.1
LVIVD repeat-containing protein.
  
     0.497
SIS01164.1
Hypothetical protein.
  
     0.470
SIS08523.1
PGF-CTERM protein.
  
     0.462
SIS00885.1
PAS domain S-box-containing protein.
  
     0.444
SIS04222.1
Succinylglutamate desuccinylase.
  
     0.441
SIS00155.1
PAS domain S-box-containing protein.
  
     0.434
SIR83775.1
Putative ABC transport system permease protein.
  
     0.430
Your Current Organism:
Natronorubrum thiooxidans
NCBI taxonomy Id: 308853
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.